APL version 1.1
APL provides a novel test for association in the presence of linkage using general pedigree data.
For single markers: Martin ER, Bass MP, Hauser ER, Kaplan NL. (2003) Accounting for linkage in family-based tests of association with missing parental genotypes. American Journal of Human Genetics.73:1016-1026.
For haplotypes: Chung R-H, Hauser ER, Martin ER. (2006) The APL test: extension to general nuclear families and haplotypes and the examination of its robustness. Human Heredity. 61:189-199.
